If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ) $local_species = 'cre' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ) $local_species = 'pco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ), 'gf_id' => 'HOM05D000590', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000590' ), 'data_identifier' => 'HOM05D000590', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000590', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '945', 'num_species' => '100' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p39070' => 'bna', 'A03p57600' => 'bna', 'A04p00950' => 'bna', 'A04p24160' => 'bna', 'A05p34710' => 'bna', 'A07p25700' => 'bna', 'A09p67280' => 'bna', 'A10p10900' => 'bna', 'Aa31LG10G15730' => 'aar', 'Aa31LG1G8510' => 'aar', 'Aa31LG3G9600' => 'aar', 'Aa31LG5G5330' => 'aar', 'Aa31LG8G1960' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.60' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.128' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_228.5654' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1598' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.1908' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.2724' => 'aag', 'AagrBONN_evm.TU.Sc2ySwM_344.772' => 'aag', 'Actinidia12609' => 'ach', 'Actinidia13215' => 'ach', 'Actinidia13216' => 'ach', 'Actinidia22317' => 'ach', 'Actinidia22318' => 'ach', 'Actinidia28121' => 'ach', 'Actinidia28504' => 'ach', 'Actinidia32949' => 'ach', 'Actinidia33528' => 'ach', 'Actinidia35907' => 'ach', 'Ah.05g179600' => 'amhyb', 'Ah.06g185580' => 'amhyb', 'Ah.06g187630' => 'amhyb', 'Ah.07g205760' => 'amhyb', 'Ah.10g035720' => 'amhyb', 'Ah.10g036020' => 'amhyb', 'Ah.11g049160' => 'amhyb', 'Ah.12g062200' => 'amhyb', 'AL1G15760' => 'aly', 'AL3G27050' => 'aly', 'AL4G26890' => 'aly', 'AL5G44280' => 'aly', 'AL5G44290' => 'aly', 'AL7G24720' => 'aly', 'AL8G28130' => 'aly', 'Aqoxy1G01876' => 'aox', 'Aqoxy2G04044' => 'aox', 'Aqoxy3G00989' => 'aox', 'Aqoxy5G04231' => 'aox', 'Aqoxy5G04235' => 'aox', 'Aqoxy6G01959' => 'aox', 'Aqoxy7G00096' => 'aox', 'Aqoxy7G02430' => 'aox', 'Aqoxy7G03545' => 'aox', 'arahy.Tifrunner.gnm1.ann1.06LZL4' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.0G81PD' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.14DVUV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.27B95C' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2B8M3G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.2TKZ7Y' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.4S3ZRX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.57SLK8' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.631JZ3' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.6VV6NG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.8UN9ME' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.9LRM2R' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AM6JUY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.AP90LP' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.CMJ8L0' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.DEWH52' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E3AN2D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.I2RKDG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.KMC0NT' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.M25YX6' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.NCWU1I' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P756VC' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.SPP5W5' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TXM5HR' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.U79B3Z' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.W36I1V' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.Y6F8M2' => 'arhy', 'AT1G05830' => 'ath', 'AT2G31650' => 'ath', 'AT3G14740' => 'ath', 'AT3G61723' => 'ath', 'AT3G61730' => 'ath', 'AT3G61740' => 'ath', 'AT3G62500' => 'ath', 'AT4G27910' => 'ath', 'AT5G36000' => 'ath', 'AT5G53430' => 'ath', 'ATR0051G042' => 'atr', 'ATR0602G065' => 'atr', 'ATR0602G221' => 'atr', 'ATR0767G168' => 'atr', 'ATR0824G108' => 'atr', 'Atru.chr2.1744' => 'acertr', 'Atru.chr2.1901' => 'acertr', 'Atru.chr3.1727' => 'acertr', 'Atru.chr5.661' => 'acertr', 'Atru.chr5.662' => 'acertr', 'Atru.chr7.2494' => 'acertr', 'Atru.chr7.2495' => 'acertr', 'AUR62003779' => 'cqu', 'AUR62004138' => 'cqu', 'AUR62004487' => 'cqu', 'AUR62004488' => 'cqu', 'AUR62006105' => 'cqu', 'AUR62006521' => 'cqu', 'AUR62012442' => 'cqu', 'AUR62013940' => 'cqu', 'AUR62019387' => 'cqu', 'AUR62019672' => 'cqu', 'AUR62023465' => 'cqu', 'AUR62023466' => 'cqu', 'AUR62026377' => 'cqu', 'AUR62031566' => 'cqu', 'AUR62036478' => 'cqu', 'AUR62037096' => 'cqu', 'BcaB02g08143' => 'bca', 'BcaB02g08144' => 'bca', 'BcaB06g25360' => 'bca', 'BcaB06g28533' => 'bca', 'BcaC02g10247' => 'bca', 'BcaC02g10248' => 'bca', 'BcaC04g20451' => 'bca', 'BcaC04g20452' => 'bca', 'BcaC04g20453' => 'bca', 'BcaC05g29040' => 'bca', 'BcaC07g42107' => 'bca', 'BcaC08g45153' => 'bca', 'BcaC09g48444' => 'bca', 'BolC1t04926H' => 'bol', 'BolC4t24651H' => 'bol', 'BolC4t27580H' => 'bol', 'BolC5t33934H' => 'bol', 'BolC6t37942H' => 'bol', 'BolC6t37952H' => 'bol', 'BolC6t37953H' => 'bol', 'BolC7t46060H' => 'bol', 'BolC8t52685H' => 'bol', 'BolC9t57210H' => 'bol', 'BraA01t03954Z' => 'bra', 'BraA03t14827Z' => 'bra', 'BraA04t15812Z' => 'bra', 'BraA04t17936Z' => 'bra', 'BraA05t22287Z' => 'bra', 'BraA07t30210Z' => 'bra', 'BraA10t43178Z' => 'bra', 'C01p49700' => 'bna', 'C04p31120' => 'bna', 'C04p60890' => 'bna', 'C05p52510' => 'bna', 'C06p27710' => 'bna', 'C06p27720' => 'bna', 'C06p27870' => 'bna', 'C06p27880' => 'bna', 'C06p27910' => 'bna', 'C06p27920' => 'bna', 'C07p55810' => 'bna', 'C08p51570' => 'bna', 'C09p43290' => 'bna', 'CAN.G108.68' => 'can', 'CAN.G1166.18' => 'can', 'CAN.G17.26' => 'can', 'CAN.G19.4' => 'can', 'CAN.G374.7' => 'can', 'CAN.G375.56' => 'can', 'CAN.G628.20' => 'can', 'CAN.G669.5' => 'can', 'CAN.G669.6' => 'can', 'CAN.G710.42' => 'can', 'CAN.G93.15' => 'can', 'CAN.G986.6' => 'can', 'CAN.G986.8' => 'can', 'CANSAT21G0899' => 'cansat', 'CANSAT25G0126' => 'cansat', 'CANSAT56G2009' => 'cansat', 'CANSAT56G2355' => 'cansat', 'CARHR005360' => 'chi', 'CARHR055570' => 'chi', 'CARHR089680' => 'chi', 'CARHR125270' => 'chi', 'CARHR125280' => 'chi', 'CARHR172060' => 'chi', 'CARHR172070' => 'chi', 'CARHR235610' => 'chi', 'CARHR266550' => 'chi', 'Carub.0001s0518' => 'cru', 'Carub.0003s1441' => 'cru', 'Carub.0004s1295' => 'cru', 'Carub.0005s2847' => 'cru', 'Carub.0005s2848' => 'cru', 'Carub.0007s1291' => 'cru', 'Carub.0008s1359' => 'cru', 'Ca_07101_v3' => 'car', 'Ca_09505_v3' => 'car', 'Ca_12744_v3' => 'car', 'Ca_12809_v3' => 'car', 'Ca_13040_v3' => 'car', 'Ca_16699_v3' => 'car', 'Ca_23538_v3' => 'car', 'Ca_23539_v3' => 'car', 'Ca_30354_v3' => 'car', 'CBR_g18883' => 'cbr', 'CBR_g18930' => 'cbr', 'CBR_g18934' => 'cbr', 'CBR_g49078' => 'cbr', 'CBR_g71803' => 'cbr', 'Cc00_g10020' => 'ccan', 'Cc02_g01660' => 'ccan', 'Cc02_g39290' => 'ccan', 'Cc02_g39300' => 'ccan', 'Cc02_g39310' => 'ccan', 'Cc02_g39320' => 'ccan', 'Cc05_g10610' => 'ccan', 'Cc08_g00250' => 'ccan', 'CDE02G2715' => 'cde', 'CDE02G3030' => 'cde', 'CDE02G4695' => 'cde', 'CDE03G0396' => 'cde', 'CDE04G1416' => 'cde', 'CDE06G1605' => 'cde', 'CDE06G2342' => 'cde', 'CDE08G0067' => 'cde', 'CDE08G0754' => 'cde', 'CDE10G0155' => 'cde', 'CDE10G1010' => 'cde', 'CDE10G1153' => 'cde', 'Cfa001248' => 'cfa', 'Cfa003800' => 'cfa', 'Cfa008549' => 'cfa', 'Cfa010536' => 'cfa', 'Cfa013108' => 'cfa', 'Cfa016217' => 'cfa', 'Cfa022296' => 'cfa', 'Cfa026781' => 'cfa', 'Ciclev10010345m.g' => 'ccl', 'Ciclev10010421m.g' => 'ccl', 'Ciclev10018602m.g' => 'ccl', 'Ciclev10018614m.g' => 'ccl', 'Ciclev10018749m.g' => 'ccl', 'Ciclev10020309m.g' => 'ccl', 'Ciclev10021099m.g' => 'ccl', 'Ciclev10023676m.g' => 'ccl', 'CiPaw.01G108600' => 'cil', 'CiPaw.02G040500' => 'cil', 'CiPaw.02G040600' => 'cil', 'CiPaw.02G040800' => 'cil', 'CiPaw.05G251600' => 'cil', 'CiPaw.06G010100' => 'cil', 'CiPaw.07G226700' => 'cil', 'CiPaw.11G155300' => 'cil', 'CiPaw.12G109900' => 'cil', 'ClCG05G008880' => 'cla', 'ClCG06G001200' => 'cla', 'ClCG08G003700' => 'cla', 'ClCG11G017110' => 'cla', 'COL.COLO4_06290' => 'col', 'COL.COLO4_06291' => 'col', 'COL.COLO4_07706' => 'col', 'COL.COLO4_11266' => 'col', 'COL.COLO4_17463' => 'col', 'COL.COLO4_18904' => 'col', 'COL.COLO4_18905' => 'col', 'COL.COLO4_18906' => 'col', 'Cpa.g.sc1162.1' => 'cpa', 'Cpa.g.sc187.20' => 'cpa', 'Cpa.g.sc187.21' => 'cpa', 'Cpa.g.sc3.73' => 'cpa', 'Cpa.g.sc50.130' => 'cpa', 'Cpa.g.sc50.131' => 'cpa', 'Cpa.g.sc50.132' => 'cpa', 'Cpa.g.sc96.10' => 'cpa', 'Cpa.g.sc96.9' => 'cpa', 'Cre03.g197700' => 'cre', 'Cre11.g475950' => 'cre', 'Cre12.g515050' => 'cre', 'Cre17.g702351' => 'cre', 'CsaV3_3G019960' => 'csa', 'CsaV3_4G032770' => 'csa', 'CsaV3_6G003090' => 'csa', 'CsaV3_6G007130' => 'csa', 'CsaV3_6G007140' => 'csa', 'CSS0002741' => 'camsi', 'CSS0003243' => 'camsi', 'CSS0004481' => 'camsi', 'CSS0007436' => 'camsi', 'CSS0011660' => 'camsi', 'CSS0014100' => 'camsi', 'CSS0015425' => 'camsi', 'CSS0016052' => 'camsi', 'CSS0028771' => 'camsi', 'CSS0029067' => 'camsi', 'CSS0032606' => 'camsi', 'CSS0042763' => 'camsi', 'CSS0046178' => 'camsi', 'CSS0047038' => 'camsi', 'CSS0048359' => 'camsi', 'CSS0049852' => 'camsi', 'DCAR_006973' => 'dca', 'DCAR_008664' => 'dca', 'DCAR_010605' => 'dca', 'DCAR_014542' => 'dca', 'DCAR_019620' => 'dca', 'DCAR_023890' => 'dca', 'DCAR_029033' => 'dca', 'DCAR_029053' => 'dca', 'DCAR_029056' => 'dca', 'DCAR_029931' => 'dca', 'Dinv13353' => 'din', 'Dinv13577' => 'din', 'Dinv18158' => 'din', 'Dinv18162' => 'din', 'Dinv22650' => 'din', 'Dinv22651' => 'din', 'Dinv29292' => 'din', 'Dinv35112' => 'din', 'Dinv35113' => 'din', 'Dinv35325' => 'din', 'Dinv44239' => 'din', 'Duzib084G1179' => 'dzi', 'Duzib133G0676' => 'dzi', 'Duzib133G1228' => 'dzi', 'Duzib138G1692' => 'dzi', 'Duzib150G0340' => 'dzi', 'Duzib150G1205' => 'dzi', 'Duzib168G1510' => 'dzi', 'Duzib205G1581' => 'dzi', 'Duzib213G0379' => 'dzi', 'ECA232G2153' => 'eca', 'ECA233G2054' => 'eca', 'ECA234G3513' => 'eca', 'ECA236G0454' => 'eca', 'ECA236G1053' => 'eca', 'ECA248G0426' => 'eca', 'EL10Ac1g00274' => 'bvu', 'EL10Ac1g00275' => 'bvu', 'EL10Ac2g04159' => 'bvu', 'EL10Ac3g05298' => 'bvu', 'EL10Ac4g08438' => 'bvu', 'EL10Ac4g08860' => 'bvu', 'EL10Ac5g11624' => 'bvu', 'EL10Ac6g14075' => 'bvu', 'Eucgr.A01463' => 'egr', 'Eucgr.D02371' => 'egr', 'Eucgr.D02372' => 'egr', 'Eucgr.E02081' => 'egr', 'Eucgr.E03070' => 'egr', 'Eucgr.F01799' => 'egr', 'Eucgr.F03226' => 'egr', 'Eucgr.H00451' => 'egr', 'Eucgr.L01330' => 'egr', 'FAN01G1788' => 'fan', 'FAN01G2269' => 'fan', 'FAN01G2486' => 'fan', 'FAN03G0672' => 'fan', 'FAN03G1068' => 'fan', 'FAN03G3103' => 'fan', 'FAN03G3291' => 'fan', 'FAN06G0024' => 'fan', 'FAN06G0495' => 'fan', 'FAN06G0513' => 'fan', 'FAN06G1744' => 'fan', 'FAN06G1873' => 'fan', 'FAN06G4911' => 'fan', 'FAN06G4986' => 'fan', 'FAN07G2789' => 'fan', 'FAN10G0781' => 'fan', 'FAN10G1076' => 'fan', 'FAN10G1590' => 'fan', 'FAN10G2754' => 'fan', 'FAN10G3131' => 'fan', 'FAN10G3228' => 'fan', 'FAN10G3498' => 'fan', 'FAN11G1469' => 'fan', 'FAN12G2369' => 'fan', 'FAN12G4006' => 'fan', 'FAN16G1913' => 'fan', 'FAN17G1987' => 'fan', 'FAN19G0039' => 'fan', 'FAN20G2931' => 'fan', 'FAN21G3792' => 'fan', 'FAN22G1397' => 'fan', 'FAN23G0410' => 'fan', 'FAN24G2365' => 'fan', 'FAN25G1530' => 'fan', 'FAN26G1128' => 'fan', 'FAN26G1221' => 'fan', 'FAN26G3070' => 'fan', 'FAN27G0748' => 'fan', 'FAN28G0457' => 'fan', 'FvH4_1g22790' => 'fve', 'FvH4_2g28350' => 'fve', 'FvH4_3g17540' => 'fve', 'FvH4_3g17570' => 'fve', 'FvH4_4g12210' => 'fve', 'FvH4_7g16360' => 'fve', 'FvH4_7g16370' => 'fve', 'FvH4_7g31710' => 'fve', 'Glyma.03G027950' => 'gma', 'Glyma.03G215600' => 'gma', 'Glyma.04G236500' => 'gma', 'Glyma.06G127800' => 'gma', 'Glyma.07G056000' => 'gma', 'Glyma.07G056100' => 'gma', 'Glyma.08G258500' => 'gma', 'Glyma.14G112700' => 'gma', 'Glyma.15G210600' => 'gma', 'Glyma.15G211600' => 'gma', 'Glyma.16G024900' => 'gma', 'Glyma.16G025000' => 'gma', 'Glyma.17G215200' => 'gma', 'Glyma.18G282700' => 'gma', 'Glyma.19G057900' => 'gma', 'Glyma.19G058100' => 'gma', 'Glyma.19G066800' => 'gma', 'Glyma.19G212100' => 'gma', 'Gohir.A04G045500' => 'ghi', 'Gohir.A05G414100' => 'ghi', 'Gohir.A07G030000' => 'ghi', 'Gohir.A08G034400' => 'ghi', 'Gohir.A10G136500' => 'ghi', 'Gohir.A12G112000' => 'ghi', 'Gohir.A12G250500' => 'ghi', 'Gohir.D04G002000' => 'ghi', 'Gohir.D05G337300' => 'ghi', 'Gohir.D07G033800' => 'ghi', 'Gohir.D08G044900' => 'ghi', 'Gohir.D10G130300' => 'ghi', 'Gohir.D12G115600' => 'ghi', 'Gohir.D12G251300' => 'ghi', 'Gorai.001G035300' => 'gra', 'Gorai.004G043900' => 'gra', 'Gorai.008G125100' => 'gra', 'Gorai.008G269400' => 'gra', 'Gorai.009G361500' => 'gra', 'Gorai.011G144000' => 'gra', 'Gorai.012G003100' => 'gra', 'GSVIVG01013555001' => 'vvi', 'GSVIVG01014083001' => 'vvi', 'GSVIVG01018567001' => 'vvi', 'GSVIVG01027095001' => 'vvi', 'GSVIVG01027098001' => 'vvi', 'GSVIVG01027101001' => 'vvi', 'GSVIVG01027108001' => 'vvi', 'GSVIVG01027114001' => 'vvi', 'GSVIVG01027116001' => 'vvi', 'GSVIVG01027118001' => 'vvi', 'GSVIVG01035924001' => 'vvi', 'GSVIVG01035925001' => 'vvi', 'GSVIVG01038708001' => 'vvi', 'HanXRQChr01g0030621' => 'han', 'HanXRQChr04g0120221' => 'han', 'HanXRQChr04g0120231' => 'han', 'HanXRQChr09g0243571' => 'han', 'HanXRQChr09g0252891' => 'han', 'HanXRQChr11g0330421' => 'han', 'HanXRQChr11g0345681' => 'han', 'HanXRQChr13g0390161' => 'han', 'HanXRQChr16g0524131' => 'han', 'Haze_00225' => 'cav', 'Haze_08447' => 'cav', 'Haze_10679' => 'cav', 'Haze_11082' => 'cav', 'Haze_15658' => 'cav', 'Haze_15659' => 'cav', 'Haze_21466' => 'cav', 'Haze_27090' => 'cav', 'Hma1.2p1_0404F.1_g145490' => 'hma', 'Hma1.2p1_0412F.1_g147170' => 'hma', 'Hma1.2p1_0466F.1_g158550' => 'hma', 'HPP92_000484' => 'vpl', 'HPP92_002828' => 'vpl', 'HPP92_008119' => 'vpl', 'HPP92_008624' => 'vpl', 'HPP92_008625' => 'vpl', 'HPP92_008626' => 'vpl', 'HPP92_008737' => 'vpl', 'HPP92_008738' => 'vpl', 'HPP92_009972' => 'vpl', 'HPP92_021749' => 'vpl', 'Hund04451' => 'sun', 'Hund10399' => 'sun', 'Hund10609' => 'sun', 'Hund15143' => 'sun', 'Hund16709' => 'sun', 'Lalb_Chr01g0006941' => 'lal', 'Lalb_Chr04g0258071' => 'lal', 'Lalb_Chr08g0240301' => 'lal', 'Lalb_Chr10g0100491' => 'lal', 'Lalb_Chr10g0100501' => 'lal', 'Lalb_Chr10g0100511' => 'lal', 'Lalb_Chr11g0066801' => 'lal', 'Lalb_Chr11g0066811' => 'lal', 'Lalb_Chr15g0076261' => 'lal', 'Lalb_Chr17g0336461' => 'lal', 'Lalb_Chr23g0271561' => 'lal', 'Lj1C1015G9' => 'lonja', 'Lj1g0002791' => 'lja', 'Lj1g0009263' => 'lja', 'Lj1g0015185' => 'lja', 'Lj1g0015259' => 'lja', 'Lj1g0024416' => 'lja', 'Lj3C343G2' => 'lonja', 'Lj3g0003332' => 'lja', 'Lj3g0021311' => 'lja', 'Lj3g0026308' => 'lja', 'Lj5g0001427' => 'lja', 'Lj5g0010657' => 'lja', 'Lj7A501T47' => 'lonja', 'Lj7A728T60' => 'lonja', 'Lj7A728T61' => 'lonja', 'Lj7A728T62' => 'lonja', 'Lj7C501G5' => 'lonja', 'Lj7P728T26' => 'lonja', 'Lj8P145T49' => 'lonja', 'Lj9C597G15' => 'lonja', 'Lsat_1_v5_gn_1_43780' => 'lsa', 'Lsat_1_v5_gn_4_33120' => 'lsa', 'Lsat_1_v5_gn_5_63200' => 'lsa', 'Lsat_1_v5_gn_7_100300' => 'lsa', 'Lsat_1_v5_gn_7_1240' => 'lsa', 'Lsat_1_v5_gn_9_58321' => 'lsa', 'Manes.01G246600' => 'mes', 'Manes.03G012400' => 'mes', 'Manes.03G078000' => 'mes', 'Manes.04G059300' => 'mes', 'Manes.05G023250' => 'mes', 'Manes.14G006400' => 'mes', 'Mapoly0001s0118' => 'mpo', 'Mapoly0002s0198' => 'mpo', 'Mapoly0051s0016' => 'mpo', 'Mapoly0090s0049' => 'mpo', 'Mapoly0251s0003' => 'mpo', 'MBI02_g37325_MAGBIO' => 'mbi', 'MBI04_g29338_MAGBIO' => 'mbi', 'MBI06_g08454_MAGBIO' => 'mbi', 'MBI06_g08469_MAGBIO' => 'mbi', 'MBI07_g07102_MAGBIO' => 'mbi', 'MBI11_g00125_MAGBIO' => 'mbi', 'MCO03G190' => 'mco', 'MCO07G206' => 'mco', 'MCO07G671' => 'mco', 'MD01G1080100' => 'mdo', 'MD01G1080200' => 'mdo', 'MD01G1220300' => 'mdo', 'MD03G1251300' => 'mdo', 'MD04G1028500' => 'mdo', 'MD04G1028600' => 'mdo', 'MD04G1118000' => 'mdo', 'MD07G1149100' => 'mdo', 'MD07G1289800' => 'mdo', 'MD11G1271500' => 'mdo', 'MD13G1278800' => 'mdo', 'MD13G1279000' => 'mdo', 'MD15G1130200' => 'mdo', 'Medtr0097s0010' => 'mtr', 'Medtr0097s0020' => 'mtr', 'Medtr1g008230' => 'mtr', 'Medtr1g008250' => 'mtr', 'Medtr1g012870' => 'mtr', 'Medtr1g012890' => 'mtr', 'Medtr1g012910' => 'mtr', 'Medtr2g047220' => 'mtr', 'Medtr2g047818' => 'mtr', 'Medtr2g099320' => 'mtr', 'Medtr2g099330' => 'mtr', 'Medtr3g091310' => 'mtr', 'Medtr5g035900' => 'mtr', 'Medtr6g043250' => 'mtr', 'Medtr7g021365' => 'mtr', 'Medtr7g117355' => 'mtr', 'Medtr8g027725' => 'mtr', 'Medtr8g027735' => 'mtr', 'Medtr8g027740' => 'mtr', 'Medtr8g039340' => 'mtr', 'Medtr8g042510' => 'mtr', 'MELO3C008490.2' => 'cme', 'MELO3C022413.2' => 'cme', 'MELO3C022415.2' => 'cme', 'MELO3C025676.2' => 'cme', 'MELO3C026117.2' => 'cme', 'Migut.B01870' => 'egut', 'Migut.F00224' => 'egut', 'Migut.H02030' => 'egut', 'Migut.N00443' => 'egut', 'Migut.N01546' => 'egut', 'Migut.N01547' => 'egut', 'MSTRG.17339' => 'ama', 'MSTRG.21982' => 'ama', 'MSTRG.28257' => 'ama', 'MSTRG.6694' => 'ama', 'Nitab4.5_0000838g0230' => 'nta', 'Nitab4.5_0000838g0240' => 'nta', 'Nitab4.5_0001207g0090' => 'nta', 'Nitab4.5_0001520g0030' => 'nta', 'Nitab4.5_0001526g0080' => 'nta', 'Nitab4.5_0001687g0070' => 'nta', 'Nitab4.5_0002078g0020' => 'nta', 'Nitab4.5_0003229g0070' => 'nta', 'Nitab4.5_0004999g0020' => 'nta', 'Nitab4.5_0004999g0030' => 'nta', 'Nitab4.5_0005958g0030' => 'nta', 'Nitab4.5_0012058g0010' => 'nta', 'Nitab4.5_0026039g0010' => 'nta', 'Nn1g00224' => 'nnu', 'Nn2g14772' => 'nnu', 'Nn3g19005' => 'nnu', 'Nn6g34385' => 'nnu', 'Nn7g37096' => 'nnu', 'Nn8g39696' => 'nnu', 'Oeu004946.1' => 'oeu', 'Oeu005375.1' => 'oeu', 'Oeu010890.3' => 'oeu', 'Oeu013403.1' => 'oeu', 'Oeu015361.1' => 'oeu', 'Oeu015362.1' => 'oeu', 'Oeu019754.1' => 'oeu', 'Oeu019758.1' => 'oeu', 'Oeu029902.1' => 'oeu', 'Oeu037087.2' => 'oeu', 'Oeu041317.3' => 'oeu', 'Oeu064881.1' => 'oeu', 'Os01g0218800' => 'osa', 'Os01g0218900' => 'osa', 'Os01g0219200' => 'osa', 'Os01g0655300' => 'osa', 'Os08g0290500' => 'osa', 'Os09g0134500' => 'osa', 'Os09g0556700' => 'osa', 'Os11g0300650' => 'osa', 'Os12g0613200' => 'osa', 'Peaxi162Scf00089g01741' => 'pax', 'Peaxi162Scf00116g00109' => 'pax', 'Peaxi162Scf00286g00341' => 'pax', 'Peaxi162Scf00286g00342' => 'pax', 'Peaxi162Scf00550g00547' => 'pax', 'Peaxi162Scf00786g00322' => 'pax', 'Peaxi162Scf00786g00323' => 'pax', 'PGR031G1051' => 'pgr', 'PGR031G1800' => 'pgr', 'PGR031G2043' => 'pgr', 'PGR042G0689' => 'pgr', 'PGSC0003DMG400000222' => 'stu', 'PGSC0003DMG400001332' => 'stu', 'PGSC0003DMG400003421' => 'stu', 'PGSC0003DMG400007086' => 'stu', 'PGSC0003DMG400009121' => 'stu', 'PGSC0003DMG400018162' => 'stu', 'PGSC0003DMG400020880' => 'stu', 'PGSC0003DMG400034522' => 'stu', 'PGSC0003DMG400042411' => 'stu', 'Phvul.001G047700' => 'pvu', 'Phvul.001G208500' => 'pvu', 'Phvul.002G093900' => 'pvu', 'Phvul.004G085300' => 'pvu', 'Phvul.008G018500' => 'pvu', 'Phvul.009G053400' => 'pvu', 'Phvul.010G113800' => 'pvu', 'Phvul.010G113900' => 'pvu', 'Phvul.011G170000' => 'pvu', 'Potri.001G382500' => 'ptr', 'Potri.002G170600' => 'ptr', 'Potri.002G232800' => 'ptr', 'Potri.011G103100' => 'ptr', 'Potri.012G013900' => 'ptr', 'Potri.014G098300' => 'ptr', 'Potri.014G098400' => 'ptr', 'Potri.014G146300' => 'ptr', 'Potri.015G014300' => 'ptr', 'Potri.018G023000' => 'ptr', 'Pp3c11_7880' => 'ppa', 'Pp3c11_7888' => 'ppa', 'Pp3c13_19810' => 'ppa', 'Pp3c13_4470' => 'ppa', 'Pp3c14_19990' => 'ppa', 'Pp3c15_18060' => 'ppa', 'Pp3c16_18950' => 'ppa', 'Pp3c1_28750' => 'ppa', 'Pp3c24_20920' => 'ppa', 'Pp3c2_10000' => 'ppa', 'Pp3c3_23770' => 'ppa', 'Pp3c5_20190' => 'ppa', 'Pp3c6_7710' => 'ppa', 'Pp3c6_8570' => 'ppa', 'Pp3c7_26660' => 'ppa', 'Pp3c9_22160' => 'ppa', 'PRCOL_00000455' => 'pco', 'PRCOL_00002763' => 'pco', 'PRCOL_00005644' => 'pco', 'PRCOL_00007083' => 'pco', 'Prupe.1G177800' => 'ppe', 'Prupe.1G485700' => 'ppe', 'Prupe.2G187500' => 'ppe', 'Prupe.2G187600' => 'ppe', 'Prupe.2G311000' => 'ppe', 'Prupe.4G155300' => 'ppe', 'Psat0s1718g0120' => 'psa', 'Psat0s1718g0200' => 'psa', 'Psat0s4463g0080' => 'psa', 'Psat0s4463g0120' => 'psa', 'Psat0s5291g0080' => 'psa', 'Psat0s5291g0120' => 'psa', 'Psat3g114680' => 'psa', 'Psat3g189880' => 'psa', 'Psat4g138760' => 'psa', 'Psat4g160760' => 'psa', 'Psat4g160800' => 'psa', 'Psat4g169600' => 'psa', 'Psat5g077640' => 'psa', 'Psat6g034360' => 'psa', 'Psat7g029160' => 'psa', 'Psat7g110360' => 'psa', 'PSO017G6033' => 'pso', 'PSO063G3494' => 'pso', 'PSO063G6641' => 'pso', 'PSO135G0428' => 'pso', 'PSO170G3591' => 'pso', 'PSO384G0069' => 'pso', 'PSO478G0645' => 'pso', 'PSO541G5312' => 'pso', 'PSO675G2935' => 'pso', 'PSO675G4267' => 'pso', 'PSO782G3674' => 'pso', 'QL02p020481' => 'qlo', 'QL04p061125' => 'qlo', 'QL04p061137' => 'qlo', 'QL08p025144' => 'qlo', 'QL09p009467' => 'qlo', 'QL10p044299' => 'qlo', 'RcHm_v2.0_Chr1g0359371' => 'rch', 'RcHm_v2.0_Chr1g0359381' => 'rch', 'RcHm_v2.0_Chr1g0380891' => 'rch', 'RcHm_v2.0_Chr1g0380901' => 'rch', 'RcHm_v2.0_Chr2g0117111' => 'rch', 'RcHm_v2.0_Chr4g0409981' => 'rch', 'RcHm_v2.0_Chr4g0425611' => 'rch', 'RcHm_v2.0_Chr5g0029121' => 'rch', 'RcHm_v2.0_Chr5g0029141' => 'rch', 'RcHm_v2.0_Chr5g0029161' => 'rch', 'RcHm_v2.0_Chr5g0029281' => 'rch', 'RcHm_v2.0_Chr5g0067221' => 'rch', 'RcHm_v2.0_Chr6g0297291' => 'rch', 'Rhsim01G0172200' => 'rsi', 'Rhsim01G0172300' => 'rsi', 'Rhsim02G0205200' => 'rsi', 'Rhsim02G0230200' => 'rsi', 'Rhsim03G0207900' => 'rsi', 'Rhsim09G0037300' => 'rsi', 'Sabra02G0141800' => 'sbr', 'Sabra02G0141900' => 'sbr', 'Sabra02G0177600' => 'sbr', 'Sabra06G0148100' => 'sbr', 'Sabra08G0120400' => 'sbr', 'Sabra11G0068200' => 'sbr', 'Sabra11G0077600' => 'sbr', 'Sabra11G0082500' => 'sbr', 'Sabra12G0017900' => 'sbr', 'Sabra14G0072100' => 'sbr', 'Sabra15G0011800' => 'sbr', 'Sabra16G0120300' => 'sbr', 'Sabra16G0251900' => 'sbr', 'Sabra18G0025500' => 'sbr', 'SalBow1G4889' => 'sbo', 'SalBow3G4091' => 'sbo', 'SalBow4G1906' => 'sbo', 'SalBow5G0203' => 'sbo', 'SalBow6G2045' => 'sbo', 'Sc01g0002720' => 'sci', 'Sc06g0000460' => 'sci', 'Sc06g0000470' => 'sci', 'Sc06g0000480' => 'sci', 'Sc07g0002360' => 'sci', 'Sc07g0007210' => 'sci', 'Sc19g0000850' => 'sci', 'Sc26g0000660' => 'sci', 'Sc26g0000670' => 'sci', 'Sed0003230' => 'sed', 'Sed0010158' => 'sed', 'Sed0011378' => 'sed', 'Sed0014657' => 'sed', 'Sed0020632' => 'sed', 'Sed0026193' => 'sed', 'Sed0026222' => 'sed', 'SEGI_01413' => 'sgi', 'SEGI_04349' => 'sgi', 'SEGI_06897' => 'sgi', 'SEGI_07265' => 'sgi', 'SEGI_08329' => 'sgi', 'SEGI_09361' => 'sgi', 'SEGI_11310' => 'sgi', 'SEGI_13990' => 'sgi', 'SEGI_15417' => 'sgi', 'SEGI_19416' => 'sgi', 'SEGI_19760' => 'sgi', 'SEGI_27180' => 'sgi', 'SEGI_27414' => 'sgi', 'SEGI_36406' => 'sgi', 'SEGI_37128' => 'sgi', 'SEGI_41134' => 'sgi', 'SGA_v2.0_scaffold11G05734' => 'sas', 'SGA_v2.0_scaffold130G34256' => 'sas', 'SGA_v2.0_scaffold163G37976' => 'sas', 'SGA_v2.0_scaffold24G10699' => 'sas', 'SGA_v2.0_scaffold290G47293' => 'sas', 'SGA_v2.0_scaffold43G16361' => 'sas', 'SGA_v2.0_scaffold44G16791' => 'sas', 'SGA_v2.0_scaffold54G19650' => 'sas', 'SGA_v2.0_scaffold5G03015' => 'sas', 'SGA_v2.0_scaffold64G21984' => 'sas', 'SHI02383' => 'shi', 'SHI13291' => 'shi', 'SHI13292' => 'shi', 'SHI13293' => 'shi', 'SHI13296' => 'shi', 'SHI13297' => 'shi', 'SHI33754' => 'shi', 'SHI33756' => 'shi', 'SHI33758' => 'shi', 'SHI38945' => 'shi', 'SMO143G0053' => 'smo', 'SMO164G0232' => 'smo', 'SMO200G0118' => 'smo', 'SMO236G0090' => 'smo', 'SMO269G0045' => 'smo', 'SMO356G0085' => 'smo', 'SMO356G0541' => 'smo', 'SMO361G0148' => 'smo', 'SMO364G0190' => 'smo', 'Solyc01g095870.3' => 'sly', 'Solyc01g095890.4' => 'sly', 'Solyc03g083410.3' => 'sly', 'Solyc03g112690.1' => 'sly', 'Solyc07g062100.4' => 'sly', 'Solyc08g041740.1' => 'sly', 'Solyc08g041760.2' => 'sly', 'Solyc09g098260.3' => 'sly', 'Sopen01g039610' => 'spe', 'Sopen01g039630' => 'spe', 'Sopen03g023180' => 'spe', 'Sopen03g031770' => 'spe', 'Sopen07g030360' => 'spe', 'Sopen08g011870' => 'spe', 'Sopen08g011900' => 'spe', 'Sopen08g011910' => 'spe', 'Sopen09g036190' => 'spe', 'Sp1g04640' => 'spa', 'Sp3g12970' => 'spa', 'Sp4g14050' => 'spa', 'Sp5g01630' => 'spa', 'Sp5g01640' => 'spa', 'Sp6g15560' => 'spa', 'Sp7g08040' => 'spa', 'Sp7g25880' => 'spa', 'TAR362G0932' => 'tar', 'TAR365G1034' => 'tar', 'TAR375G0182' => 'tar', 'TAR375G0589' => 'tar', 'TAR375G0739' => 'tar', 'TAR626G1366' => 'tar', 'TAR627G0119' => 'tar', 'TAR627G0624' => 'tar', 'TAR629G1215' => 'tar', 'TAR636G2375' => 'tar', 'TAR636G2428' => 'tar', 'THA.LOC104798760' => 'tha', 'THA.LOC104800295' => 'tha', 'THA.LOC104800910' => 'tha', 'THA.LOC104802069' => 'tha', 'THA.LOC104802071' => 'tha', 'THA.LOC104811923' => 'tha', 'THA.LOC104815012' => 'tha', 'THA.LOC104815580' => 'tha', 'THA.LOC104817360' => 'tha', 'THA.LOC104822584' => 'tha', 'Thecc.01G343000' => 'tca', 'Thecc.01G343200' => 'tca', 'Thecc.02G302600' => 'tca', 'Thecc.03G197100' => 'tca', 'Thecc.04G180700' => 'tca', 'Thecc.07G135100' => 'tca', 'Thecc.07G193900' => 'tca', 'Thecc.07G194000' => 'tca', 'Thecc.09G020000' => 'tca', 'Thhalv10005766m.g' => 'esa', 'Thhalv10006430m.g' => 'esa', 'Thhalv10006646m.g' => 'esa', 'Thhalv10012524m.g' => 'esa', 'Thhalv10016217m.g' => 'esa', 'Thhalv10021064m.g' => 'esa', 'Thhalv10024299m.g' => 'esa', 'TPR.G12101' => 'tpr', 'TPR.G15352' => 'tpr', 'TPR.G15357' => 'tpr', 'TPR.G16489' => 'tpr', 'TPR.G18328' => 'tpr', 'TPR.G21216' => 'tpr', 'TPR.G23333' => 'tpr', 'TPR.G271' => 'tpr', 'TPR.G2958' => 'tpr', 'TPR.G3009' => 'tpr', 'TPR.G31860' => 'tpr', 'TPR.G38859' => 'tpr', 'TPR.G40394' => 'tpr', 'TPR.G4744' => 'tpr', 'TWI14G0749' => 'twi', 'TWI14G0815' => 'twi', 'TWI23G0304' => 'twi', 'TWI32G0726' => 'twi', 'TWI38G1174' => 'twi', 'TWI39G0115' => 'twi', 'TWI39G0773' => 'twi', 'TWI59G0780' => 'twi', 'TWI63G0312' => 'twi', 'unitig_578.g16517' => 'ugi', 'unitig_699.g19239' => 'ugi', 'unitig_747.g21341' => 'ugi', 'unitig_8.g4780' => 'ugi', 'unitig_92.g28257' => 'ugi', 'vmacro00564' => 'vma', 'vmacro06539' => 'vma', 'vmacro11208' => 'vma', 'vmacro11976' => 'vma', 'vmacro12678' => 'vma', 'vmacro21896' => 'vma', 'VMungo0251G0981' => 'vmu', 'VMungo0331G1369' => 'vmu', 'VMungo0331G1406' => 'vmu', 'VMungo0331G1881' => 'vmu', 'VMungo0647G0757' => 'vmu', 'VMungo1127G1365' => 'vmu', 'VMungo1309G0002' => 'vmu', 'VMungo1383G1517' => 'vmu', 'VMungo1383G1591' => 'vmu', 'Zm00001eb104540' => 'zma', 'Zm00001eb119810' => 'zma', 'Zm00001eb119830' => 'zma', 'Zm00001eb122030' => 'zma', 'Zm00001eb158060' => 'zma', 'Zm00001eb174400' => 'zma', 'Zm00001eb308480' => 'zma', 'Zm00001eb338670' => 'zma', 'Zm00001eb338700' => 'zma', 'Zm00001eb359430' => 'zma' ) $gf_id = 'HOM05D000590' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000590' ) $data_identifier = 'HOM05D000590' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 21, 'aar' => (int) 5, 'aag' => (int) 7, 'ach' => (int) 10, 'amhyb' => (int) 8, 'aly' => (int) 7, 'aox' => (int) 9, 'arhy' => (int) 27, 'ath' => (int) 10, 'atr' => (int) 5, 'acertr' => (int) 7, 'cqu' => (int) 16, 'bca' => (int) 13, 'bol' => (int) 10, 'bra' => (int) 7, 'can' => (int) 13, 'cansat' => (int) 4, 'chi' => (int) 9, 'cru' => (int) 7, 'car' => (int) 9, 'cbr' => (int) 5, 'ccan' => (int) 8, 'cde' => (int) 12, 'cfa' => (int) 8, 'ccl' => (int) 8, 'cil' => (int) 9, 'cla' => (int) 4, 'col' => (int) 8, 'cpa' => (int) 9, 'cre' => (int) 4, 'csa' => (int) 5, 'camsi' => (int) 16, 'dca' => (int) 10, 'din' => (int) 11, 'dzi' => (int) 9, 'eca' => (int) 6, 'bvu' => (int) 8, 'egr' => (int) 9, 'fan' => (int) 39, 'fve' => (int) 8, 'gma' => (int) 18, 'ghi' => (int) 14, 'gra' => (int) 7, 'vvi' => (int) 13, 'han' => (int) 9, 'cav' => (int) 8, 'hma' => (int) 3, 'vpl' => (int) 10, 'sun' => (int) 5, 'lal' => (int) 11, 'lonja' => (int) 10, 'lja' => (int) 10, 'lsa' => (int) 6, 'mes' => (int) 6, 'mpo' => (int) 5, 'mbi' => (int) 6, 'mco' => (int) 3, 'mdo' => (int) 13, 'mtr' => (int) 21, 'cme' => (int) 5, 'egut' => (int) 6, 'ama' => (int) 4, 'nta' => (int) 13, 'nnu' => (int) 6, 'oeu' => (int) 12, 'osa' => (int) 9, 'pax' => (int) 7, 'pgr' => (int) 4, 'stu' => (int) 9, 'pvu' => (int) 9, 'ptr' => (int) 10, 'ppa' => (int) 16, 'pco' => (int) 4, 'ppe' => (int) 6, 'psa' => (int) 16, 'pso' => (int) 11, 'qlo' => (int) 6, 'rch' => (int) 13, 'rsi' => (int) 6, 'sbr' => (int) 14, 'sbo' => (int) 5, 'sci' => (int) 9, 'sed' => (int) 7, 'sgi' => (int) 16, 'sas' => (int) 10, 'shi' => (int) 10, 'smo' => (int) 9, 'sly' => (int) 8, 'spe' => (int) 9, 'spa' => (int) 8, 'tar' => (int) 11, 'tha' => (int) 10, 'tca' => (int) 9, 'esa' => (int) 7, 'tpr' => (int) 14, 'twi' => (int) 9, 'ugi' => (int) 5, 'vma' => (int) 6, 'vmu' => (int) 9, 'zma' => (int) 10 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb359430' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1